Felipe De Almeida
Engenheiro at Autônomo
São Paulo, Brazil
Summary
👤
Senior🎓
Top SchoolFelipe De Almeida is an engineer and full‑stack developer from São Paulo with nine years of experience blending production engineering, web and mobile app development, and multimedia production. He combines hands-on work in energy and environmental startups with a background in cinematography and audio production, bringing creative problem-solving and leadership to cross-disciplinary teams. As an active open-source contributor to the nf-core bioinformatics ecosystem, he has improved Nextflow modules and single-cell RNA‑seq tooling, demonstrating practical backend and pipeline expertise. Felipe is also a microentrepreneur in digital marketing and is completing a production engineering degree, signaling a mix of technical depth, product-mindedness, and entrepreneurial drive.
9 years of coding experience
3 years of employment as a software developer
Ensino Médio com Habilitação Profissional de Técnico em Desenvolvimento de Sistemas, Ensino Médio com Habilitação Profissional de Técnico em Desenvolvimento de Sistemas at ETEC de ItaqueraBacharelado em Engenharia, Engenharia de Produção, Bacharelado em Engenharia, Engenharia de Produção at Univesp Oficial
Stackoverflow
53reputation
6kreached
0answers
1question
Github Skills (18)
go-modules10
python10
dsl10
work-flow10
workflow-engine10
kernel-module10
nextflow10
pipeline10
bioinformatics10
jsmodules10
dockers9
containerization9
docker9
genomics9
testing8
Programming languages (13)
Github contributions (5)
nf-core/scrnaseq
May 2022 - Nov 2022
A single-cell RNAseq pipeline for 10X genomics data
Role in this project:
Backend Developer
Backend DeveloperContributions:1 release, 191 reviews, 155 commits in 5 months
Contributions summary:Felipe primarily focused on improving the `check_samplesheet.py` script within the nf-core/scrnaseq pipeline. Their contributions involved handling replicates, adding a cellranger parameter, and reverting changes to allow for technical replicates. They also updated several modules related to the Cellranger pipeline and made adjustments to the kallisto and alevin modules to handle multiple replicates and fix channel generation issues. Additionally, the user created modules for converting matrix files to h5ad and seurat objects.
nf-core10xrnaseqpipelinegenomics-data
nf-core/modules
Feb 2022 - Nov 2022
Repository to host tool-specific module files for the Nextflow DSL2 community!
Role in this project:Backend Developer
Backend DeveloperContributions:41 reviews, 5 commits, 26 PRs in 9 months
Contributions summary:Felipe primarily contributes to the nf-core/modules repository, which hosts modules for Nextflow pipelines. Their work includes adding and modifying modules for specific bioinformatics tools, such as Raven and Shasta, which involves writing and adapting Nextflow scripts and container configurations. They also make updates to existing modules, like Cellranger and Kallisto, to address memory issues or improve functionality, demonstrating expertise in bioinformatics pipeline development. Their commits reveal strong involvement in testing and ensuring the modules work with diverse datasets.
nf-corehostnextflow-dsl2nextflowdsl2
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