Filippo Utro
Senior Research Scientist at IBM
Town of Yorktown, New York, United States
Summary
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Senior🎓
Top SchoolFilippo Utro is a Senior Research Scientist at IBM with over a decade of experience applying algorithms and data structures to genomic medicine, population genomics, and microbiome research. He progressed from postdoctoral work in computational genomics to a sustained research career at IBM TJ Watson Research Center, blending strong software engineering skills (Python, R, C/C++, MPI) with statistical and clustering methods for multidimensional biological data. His background in computer science and a PhD in Mathematics and Computer Science underpin a pragmatic approach to building scalable analytical pipelines and databases in heterogeneous computing environments. He also brings teaching experience in programming from his early academic years, reflecting an aptitude for clear communication of complex ideas. Based in Yorktown, NY, he combines deep domain knowledge with hands-on implementation, often bridging research prototypes to production-grade code.
10 years of coding experience
7 years of employment as a software developer
Laurea Magistrale, Scienze dell'Informazione, Laurea Magistrale, Scienze dell'Informazione at Università degli Studi di Palermo
English, Italian
Stackoverflow
23reputation
126reached
0answers
2questions
Github Skills (16)
genetic10
evolutionary10
cancer-genomics9
scenarios9
population-genetics9
simulation9
graph8
exchange8
bioinformatics7
elementtree6
xml6
html-parsing6
parsing6
python6
machine-learning5
Programming languages (4)
Github contributions (5)
ComputationalGenomics/SimRA
Jun 2015 - Aug 2022
SimRA (Simulation based on Random-graphs Algorithms) is a framework for simulating generic and complex evolutionary scenarios of multiple populations with subdivision and admixture. The algorithm generates a network structure, called Ancestral Recombination Graph (ARG), that models coalescence and genetic exchange events (recombinations) with SNP as well as STR polymorphisms.
Contributions:84 commits, 7 PRs, 78 pushes in 7 years 3 months
strexchangesimulationscenariossnp
BiomedSciAI/Geno4SD
Oct 2022 - Feb 2023
An python omics data toolkit for the analysis across biological scales
Contributions:4 reviews, 64 commits, 6 PRs in 4 months
biologicalbioinformaticsomicsscalescancer-genomics
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