Francesco Carli
Research Software Engineer at European Bioinformatics Institute | EMBL-EBI
Cambridge, England, United Kingdom
Summary
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Senior🎓
Top SchoolFrancesco Carli is a Research Software Engineer and PhD candidate at Scuola Normale Superiore with 12 years of experience applying deep learning and graph-based methods to social systems, bioinformatics, and computational chemistry. Currently at EMBL-EBI he builds AI-driven knowledge management systems that combine LLMs, knowledge graphs, and ML to accelerate biomedical research and drug discovery. His background blends rigorous mathematics and economics training with hands-on data science roles, enabling him to bridge theoretical models and practical pipelines for pharmacogenomics, protein design, and therapeutic discovery. He has modeled collaborative behavior on social platforms using graph representation learning and has a track record of turning interdisciplinary questions into reproducible computational tools. Based in Cambridge, he pairs curiosity about socio-economic contexts with a drive to produce methodologies that can meaningfully impact diagnosis and therapy.
12 years of coding experience
1 year of employment as a software developer
National PhD in Artificial Intelligence, National PhD in Artificial Intelligence at Scuola Normale SuperioreLaurea Magistrale Stochastics and Data Science (LM-40 Mathematics) , Laurea Magistrale Stochastics and Data Science (LM-40 Mathematics) at Università degli Studi di TorinoLaurea triennale Economia e Scienze Sociali (L-33 Scienze Economiche) , Laurea triennale Economia e Scienze Sociali (L-33 Scienze Economiche) at Università Bocconi
Italian, English, French
Stackoverflow
1reputation
0reached
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Github Skills (20)
storage9
amazon-s39
europe-pmc9
k8s8
kubernetes7
connected7
object-storage7
go7
geckodriver7
cloud-object-storage6
gecko6
citation5
firefox5
webdriver4
ids4
Programming languages (3)
Github contributions (5)
EuropePMC/Biojs.Annotator
Nov 2016 - Nov 2016
Contributions:11 commits in 1 day
EuropePMC/biojs-vis-pmccitation
Nov 2014 - Apr 2018
Contributions:10 commits, 1 PR, 6 pushes in 3 years 5 months
citationpmcconnectedeurope-pmcprincipal
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