Fumihiro Ito
Researcher at Biotech startup specializing in microbiology
Tokyo, Japan
Summary
👤
Senior🎓
Top SchoolFumihiro Ito is a Ph.D.-trained bioinformatician with 13 years of experience bridging wet-lab and computational approaches in spatial transcriptomics, RNA-seq, and multi-omics for both academia and industry. He has built spatial transcriptomics services and scalable analysis pipelines from scratch, led high-throughput RNA-seq projects, and translated complex biological datasets (including tens of thousands of microbiome samples) into actionable insights for healthcare and product development. His academic work spans comparative developmental biology and circadian/behavioral genomics, where he developed reproducible time-series analysis workflows and integrated behavioral assays with transcriptomics. Comfortable in client-facing and collaborative roles, he has driven multiple external partnerships and operationalized lab capabilities across non-model organisms. Less obvious: he pairs hands-on pipeline optimization and backend performance tuning (contributing to open-source job-queue improvements) with a strong track record of turning noisy, real-world biological data into robust biomarkers and translational research.
13 years of coding experience
4 years of employment as a software developer
Bachelor's degree, Developmental Biology and Embryology, Bachelor's degree, Developmental Biology and Embryology at Ehime UniversityUniversity of TokyoDoctor's Degree, Genetics, Doctor's Degree, Genetics at The Graduate University for Advanced Studies, SOKENDAI
English, Japanese
Github Skills (5)
configuration-management10
http10
go10
testing10
job-queue9
Programming languages (10)
Github contributions (5)
fireworq/fireworq
Oct 2019 - Oct 2019
Fireworq is a lightweight, high-performance, language-independent job queue system.
Role in this project:
Back-end Developer
Back-end DeveloperContributions:5 commits, 1 PR, 3 comments in 2 days
Contributions summary:Fumihiro primarily contributed to enhancing the performance and configuration of the Fireworq job queue system. Their work involved adding new flags to control idle connection behavior and timeout settings for HTTP connections within the dispatcher, impacting how connections are managed. They also implemented tests to validate the new configuration options. Furthermore, the user updated related documentation.
language-independentindependentjob-queuejobperformance
f110/kubeproto
Apr 2022 - Dec 2024
A plugin for Protocol Buffers to define k8s API
Contributions:158 PRs, 216 pushes, 171 branches in 2 years 8 months
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