Gabriel Cretin
I.E. Administrateur Système Linux & Bioinformaticien En IA Appliquée À La Biologie Structurale
Paris, Ile-de-France
Summary
👤
Senior🎓
Top SchoolGabriel Cretin is a PhD-trained computational biologist and Linux systems engineer who blends nine years of hands-on HPC administration with deep learning research in protein sequence and structure modeling. Based at Université Paris Cité and INSERM, he develops and deploys GPU-powered pipelines while advancing protein language models, dimensionality reduction for latent spaces, and generative approaches to local and global protein organization. His work spans from practical lab-grade system reliability to cutting-edge methods that re-rank and refine template-based structure predictions, reflecting a rare combination of production ops and methodological innovation. Past projects include applying deep neural re-ranking to Nano-ORION and integrating metabolomics preprocessing tools into large-scale workflows, showing comfort across omics modalities. A self-described coffee geek in Paris, he brings both meticulous infrastructure stewardship and a curiosity-driven scientific mindset that accelerates reproducible AI-driven biology.
9 years of coding experience
Doctorat de philosophie, Bioinformatics, Doctorat de philosophie, Bioinformatics at Université Paris CitéDUT, Biologie, Bioinformatique, DUT, Biologie, Bioinformatique at Université d'AuvergneMaster's degree, Bioinformatics, Mention Très Bien - Rang 2/21, Master's degree, Bioinformatics, Mention Très Bien - Rang 2/21 at Université Paris DiderotMathématiques et informatique, Mathématiques et informatique at Université Joseph Fourier (Grenoble I)
French, English, German
Stackoverflow
395reputation
44kreached
10answers
15questions
Github Skills (143)
trello10
python10
windows10
collaboration10
scientific-computing10
linux10
mattermost10
golang10
monorepo10
viterbi10
asana10
gitlab10
vue10
macos10
build-tools10
Programming languages (11)
Github contributions (5)
gabrielctn/fasta_project
Mar 2017 - Jun 2018
Contributions:100 pushes, 4 branches, 11 comments in 1 year 3 months
gabrielctn/spack
Oct 2023 - Jan 2025
A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
Contributions:62 pushes, 4 branches in 1 year 3 months
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