Gaignard Alban
Ingénieur Projet, Recherche Et Développement at CNRS
Nantes, Pays de la Loire, France
Summary
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Rockstar🎓
Top SchoolGaignard Alban is a CNRS research engineer based in Nantes with 11+ years of experience building software and infrastructure for life sciences, specializing in knowledge graphs, workflows and provenance for biomedical data integration. He holds a Ph.D. in Computer Science and combines deep academic training with hands-on R&D across large-scale and medical data infrastructures at CNRS, INRIA and CHU de Nantes. As an active contributor and co-lead of IFB working groups on interoperability and health, he represents French activities within the European ELIXIR ecosystem and helps shape national projects like PEPR Santé-numérique, PPR ABRomics and ANR Safe-KG. He is known for bridging research and operational deployment—translating FAIR principles into working data pipelines and services used by biomedical teams. A subtle but defining trait is his dual fluency in distributed systems engineering and semantic technologies, enabling pragmatic yet interoperable solutions for complex biomedical datasets.
10 years of coding experience
3 years of employment as a software developer
Diplome d'Ingenieur - Master Degree, Computer Science, Diplome d'Ingenieur - Master Degree, Computer Science at Université de Rennes Ilycée DescartesDoctor of Philosophy (Ph.D.), Computer Science, Obtained (very honorable), Doctor of Philosophy (Ph.D.), Computer Science, Obtained (very honorable) at Université de Nice-Sophia Antipolis
Spanish, English
Stackoverflow
1reputation
0reached
0answers
0questions
Github Skills (52)
data-formats10
snakemake10
taxonomy10
operation10
converting10
identifier10
ontology10
metadata10
ckan10
cycle10
biodiversity10
workflow-management10
fasta10
science10
tla9
Programming languages (9)
Github contributions (5)
albangaignard/fresh-toolbox
Jan 2019 - Jun 2021
A worflow and provenance-based approach to produce human and machine -oriented data summaries. Reused PROV-O, EDAM, MicroPublication ontologies, Nanopublications and the Bio.Tools bioinforatics registry.
Contributions:2 PRs, 17 pushes, 2 branches in 2 years 5 months
edamapproachprovenancegenomicsnanopublications
bio-tools/content.jsonld
Nov 2019 - Nov 2019
Contributions:2 commits, 1 push, 1 branch in 1 day
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