Gesmira Molla

Computational Biologist

Boston, Massachusetts, United States
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Summary

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Gesmira Molla is a computational biologist based in Boston with four years of experience applying bioinformatics and software development to single-cell genomics. Currently at the New York Genome Center’s Satija Lab, she contributes to core analysis tools—most notably back-end work on the widely used Seurat R toolkit, improving functions like FindTransferAnchors and documentation for reproducible vignette generation. She holds a BS (summa cum laude) in Biochemistry and an MS in Bioinformatics from Northeastern, and has hands-on industry experience from co-ops at Vertex and Pandion working across high-throughput biology and protein production. Comfortable bridging wet-lab and computational teams, she has practical experience in data analysis for clinical studies and antibody construct workflows. Colleagues describe her as detail-oriented and pragmatic, able to resolve tricky merge conflicts and make code interoperable with related packages like BPCells.
code3 years of coding experience
bookSharon High School
bookBachelor of Science - BS, Biochemistry, Summa Cum Laude, Bachelor of Science - BS, Biochemistry, Summa Cum Laude at Northeastern University
languagesAlbanian, French
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Github Skills (6)

bioinformatics10
single-cell-genomics10
r10
data-analysis9
integrate8
integrations8

Programming languages (5)

C++RHTMLJupyter NotebookPython

Github contributions (5)

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satijalab/seurat

Jul 2022 - Jul 2024

R toolkit for single cell genomics
Role in this project:
userBack-end Developer
Contributions:5 reviews, 1 PR, 14 pushes in 1 year 11 months
Contributions summary:Gesmira primarily contributed to the R toolkit for single-cell genomics, focusing on the `FindTransferAnchors` function, which involved modifying code related to assay assignment and integration. They also addressed a merge conflict in a preprocessing file. Further contributions involved making code compatible with BPCells, a package related to single-cell data analysis. Additionally, the user worked on vignette generation and documentation enhancements.
single-cell-genomicscranhuman-cell-atlasgenomicsbioinformatics
satijalab/azimuth_website

Aug 2022 - Jun 2024

Contributions:15 PRs, 65 pushes, 8 branches in 1 year 10 months
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