Giuseppe Profiti
DevOps For Bioinformatics And Research
Bologna, Emilia-Romagna, Italy
Summary
👤
Senior🎓
Top SchoolGiuseppe Profiti is a DevOps and scientific software engineer with a decade of experience building cloud-enabled information systems for research centers, hospitals and industry partners from Bologna. He combines hands-on DevOps for bioinformatics with a strong academic background—PhD and postdoctoral work focused on protein function prediction and mutation analysis—plus years teaching Python and bioinformatics algorithms. His work spans data integration, databases, NGS pipelines (Galaxy), and custom tooling to make large biological datasets usable in production research environments. As founder-level maintainer at BioDec, he translates research requirements into reproducible, deployable platforms while keeping an eye on reuse and interoperability. Less obvious: he has repeatedly bridged academia and operations, acting as local ELIXIR technical coordinator and developing both web interfaces and core annotation services. Practical, detail-oriented, he thrives on turning complex bioinformatics workflows into reliable, maintainable systems.
10 years of coding experience
7 years of employment as a software developer
University of BolognaWinter school - Proteins and their variants: structure and function predictionSoftware carpentry train the trainersDoctor of Philosophy (PhD), Doctor of Philosophy (PhD) at Università di Bologna / University of BolognaDALT Spring School 2011High School Diploma, High School Diploma at Liceo Scientifico, Vibo Valentia
Italian, English, French
Github Skills (85)
loops10
galaxy10
stable10
metagenomics10
chip-seq10
spanish9
shell8
python8
automation8
flask-extensions8
matplotlib8
endpoint8
high-resolution7
bash7
idm7
Programming languages (8)
Github contributions (5)
profgiuseppe/training-material
Aug 2019 - May 2023
A collection of Galaxy-related training material
Contributions:4 pushes in 3 years 9 months
training-materialgalaxytraining
profgiuseppe/tools-iuc
Jan 2022 - Jun 2024
Tool Shed repositories maintained by the Intergalactic Utilities Commission
Contributions:5 pushes in 2 years 5 months
intergalacticrepositoriescommission
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