Gregory Baker
Assistant Professor Division Of Oncological Sciences at OHSU Knight Cancer Institute
Portland, Oregon, United States
Summary
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Senior🎓
Top SchoolGregory Baker is an assistant professor in the Division of Oncological Sciences at OHSU and a computational biologist with a decade of experience intersecting cancer biology, immunology, and systems pharmacology. He trained at Harvard Medical School’s Laboratory of Systems Pharmacology, where he developed open, reproducible tools for multiplex tissue analysis and systemic immune profiling (e.g., MCMICRO, SYLARAS) that bridge image informatics and single-cell-level biology. His PhD and prior work on glioblastoma revealed mechanisms of perivascular invasion and immune evasion—including identification of galectin-1 as an NK-suppressive tumor factor—giving him deep translational insight into therapy resistance. Trained as a PharmD as well as a PhD, he combines clinical pharmacology perspective with rigorous computational method development to move complex tissue and immune data toward actionable cancer hypotheses.
10 years of coding experience
10 years of employment as a software developer
Doctor of Pharmacy (PharmD) Pharmacy, Doctor of Pharmacy (PharmD) Pharmacy at University of Rhode IslandUniversity of California, Los Angeles
Github Skills (19)
multiplex10
wsi10
segmentation10
filter10
robust10
microscopy10
image-processing9
imaging9
image-segmentation9
ieee6
artifacts5
expert3
machine-learning3
image-viewer2
viewer2
Programming languages (4)
Github contributions (5)
IAWG-CSBC-PSON/hack2022-01-artifacts
Jan 2022 - Sep 2023
Challenge 1: Automated Detection of Microscopy Artifacts
Contributions:1 PR, 92 pushes, 1 branch in 1 year 8 months
artifactsmicroscopymachine-learningieee
gjbaker/cylinter
Jul 2020 - Jan 2025
Contributions:176 pushes, 297 branches in 4 years 7 months
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