Guy Allard
Scientific Programmer at Leiden University Medical Center
Hoofddorp, North Holland, Netherlands
Summary
👤
Senior🎓
Top SchoolGuy Allard is a Scientific Programmer with 11 years of experience building bioinformatics tools, backend systems, and AI-driven game engines, currently based at Leiden University Medical Center. He combines strong statistical and data-visualization skills with hands-on competence in C++, Python, R, SQL and Linux to turn complex sequencing and experimental datasets into automated, reproducible pipelines. His background spans academia and industry—from developing the SPINGO classifier for next-generation sequencing to centralising demand planning processes for thousands of parts at Stryker. Comfortable with system administration and production services, he also brings low-level performance work (GPU shaders, C++) and practical experience in regulated lab environments. Colleagues value his aptitude for solving intricate technical problems end-to-end and translating research-grade methods into reliable operational tools. An interesting facet of his career is the blend of analytical chemistry and geochemistry training with modern computational bioinformatics, giving him uncommon domain breadth across wet lab and software engineering.
11 years of coding experience
3 years of employment as a software developer
Master of Science (MSc), Bioinformatics with Computational Systems Biology, Master of Science (MSc), Bioinformatics with Computational Systems Biology at University College CorkDoctor of Philosophy (PhD), Biogeochemistry, Doctor of Philosophy (PhD), Biogeochemistry at University of Plymouth
English
Github Skills (47)
jupyter10
bioinformatics10
clustering10
markov10
bokeh9
javascript9
visualization9
python9
data-visualisation9
conda9
browser9
torque9
altair9
ipywidgets9
pyodide9
Programming languages (4)
Github contributions (5)
GuyAllard/SPINGO
Oct 2014 - Apr 2018
Contributions:1 release, 29 commits, 1 PR in 3 years 6 months
ampliconsidentification
GuyAllard/markov_clustering
Sep 2017 - Dec 2018
markov clustering in python
Contributions:50 commits, 3 PRs, 31 pushes in 1 year 2 months
pythonnetworksmarkov-clusteringclusteringmarkov
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