Hassan Sirelkhatim

Machine Learning Engineer- Genomics Drug Discovery at NVIDIA

London, England, United Kingdom
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Summary

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Senior
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Top School
Hassan Sirelkhatim is a machine learning engineer and solutions architect with eight years of experience specializing in genomics and drug-discovery applications of large-scale AI. At NVIDIA he designs and optimizes training pipelines on supercomputers (e.g., Selene), accelerates transformer/GNN and LLM models for SMILES, DNA and proteins, and has delivered notable performance gains in deep learning basecalling (Bonito). He blends hands-on model optimization with customer-facing work, supporting sales and translating research prototypes into scalable deployments. His background spans industry and academia—from bioinformatics and insurance mathematics degrees to mentoring and reviewing deep RL and data science projects—giving him a rare mix of domain expertise and production ML engineering. An underappreciated strength is his experience tuning models across specialized sequence languages (molecules, genomes), enabling practical drug-discovery accelerations rather than just theoretical advances.
code8 years of coding experience
job5 years of employment as a software developer
bookBachelor's degree, Insurance Mathematics, Bachelor's degree, Insurance Mathematics at University of Copenhagen
languagesEnglish, Arabic, Danish
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Github Skills (10)

computational-biology8
docking8
binding8
transformation7
gpu5
machine-learning5
drug-discovery5
pytorch5
diffusion-models4
deep-learning3

Programming languages (3)

HTMLJupyter NotebookPython

Github contributions (5)

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MolecularAI/MolBART

Mar 2021 - Feb 2022

Pretrained SMILES transformation model for finetuning for diverse molecular tasks.
Contributions:1 review, 48 commits, 1 PR in 11 months
transformationdiversefinetuningsmilesmolecular
Contributions:10 pushes, 1 branch in 10 months
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Hassan Sirelkhatim - Machine Learning Engineer- Genomics Drug Discovery at NVIDIA