Hugues Fontenelle
Principal Bioinformatics Architect
Oslo, Norway
Summary
👤
Senior🎓
Top SchoolHugues Fontenelle is a Principal Bioinformatics Architect based in Oslo with 12 years of experience building production-ready computational pipelines and software for personalized immunotherapy and rare disease genomics. He blends hands-on coding, product and project management, and team leadership to take translational genomics tools from vision through IEC 62304-compliant roadmaps to deployed clinical analyses. His background spans academic research, medical device validation, and HPC-enabled algorithm implementation, giving him a rare fluency between wet-lab clinicians and software engineers. Hugues’s work emphasizes automation and ML-driven decision support for variant classification and vaccine personalization, and he has repeatedly led cross-disciplinary teams to turn research methods into robust clinical products. An Executive MBA and continued upskilling in bioinformatics and pharma informatics complement his technical depth with strategic product thinking.
12 years of coding experience
14 years of employment as a software developer
Executive MBA, Business Administration and Management, General, Executive MBA, Business Administration and Management, General at Quantic School of Business and Technology(Erasmus), (Erasmus) at National Hospital of Norway, OsloGeilo Winter School 2017: Machine LearningPhD, Biomedical Engineering, PhD, Biomedical Engineering at University of PatrasMOOC (Coursera, EdX) & Professional Training (PluralSight)Pharmaceutical Bioinformatics, Pharmaceutical Bioinformatics at Uppsala UniversityMSc, Computer Engineering, MSc, Computer Engineering at ECAM, Brussels(Inter-university exchange), (Inter-university exchange) at Alma Mater Studiorum – Università di Bologna
English, French, Greek, Italian, Norwegian
Stackoverflow
5,365reputation
805kreached
70answers
14questions
matlab
top-5%
image-processing
top-5%
python
top-5%
shell
top-5%
json
top-5%
command-line
top-5%
Github Skills (112)
slurm10
dataflow10
pipeline-framework10
reproducible-science10
singularity10
nextflow10
pipeline10
groovy10
dsl10
reproducible-research10
docker10
aws10
bioinformatics10
data-driven9
matlab9
Programming languages (12)
Github contributions (5)
huguesfontenelle/spliceAnnotator
Apr 2015 - Mar 2016
Contributions:34 commits, 1 push, 1 branch in 10 months
huguesfontenelle/training-course
Feb 2015 - Apr 2015
Contributions:6 pushes, 1 branch in 2 months
pythontraining
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