J Monroe

Associate Professor

Davis, California, United States
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Summary

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Senior
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J Monroe is an Associate Professor at UC Davis with a decade of experience at the intersection of plant evolutionary genomics and computational analysis. Trained with a PhD from Colorado State University, they progressed from postdoctoral work at the Max Planck Institute to faculty leadership, blending field-driven questions about plant adaptation to climate with hands-on R development and data analysis. Their background includes applied roles in industry and government (Cargill, USGS) that inform pragmatic, reproducible research practices and code-focused project work hosted on monroelab.org and GitHub. Based in Davis, CA, Monroe is known for turning complex genomic and ecological datasets into actionable insights and tools, often emphasizing open, shareable code for the research community.
code10 years of coding experience
job10 years of employment as a software developer
bookDoctor of Philosophy (Ph.D.), Plant evolutionary genomics, Doctor of Philosophy (Ph.D.), Plant evolutionary genomics at Colorado State University
bookBachelor of Science (BS), Chemistry, Molecular Biology, Bachelor of Science (BS), Chemistry, Molecular Biology at Appalachian State University
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Github Skills (41)

soil10
relation9
journal8
r-package8
distributions7
database7
genome7
genomics6
bioinformatics6
unconf6
psychology5
opencpu5
rmarkdown5
r5
reproducible-research5

Programming languages (4)

RC++NextflowHTML

Github contributions (5)

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greymonroe/polymorphology

Apr 2021 - Dec 2022

Analyze genome-wide distributions of polymorphisms in relation to gene features
Contributions:10 commits, 2 PRs, 47 pushes in 1 year 8 months
distributionsgenomegenomicsbioinformaticsgene
greymonroe/heliophila

Jul 2018 - Aug 2023

Contributions:22 pushes, 1 branch in 5 years 2 months
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J Monroe - Associate Professor