Jacek Marzec
Computational Biologist
Lisbon, Portugal
Summary
👤
Senior🎓
Top SchoolJacek Marzec is a computational biologist with nine years’ experience building reproducible bioinformatics pipelines that integrate and visualize heterogeneous cancer patient datasets, from WGS/WTS and scRNA-seq to DNA methylation and GWAS. Currently at CoLAB AccelBio in Lisbon, he focuses on multi-omics analyses to discover biomarkers and therapeutic targets for drug discovery, drawing on prior precision oncology work at the University of Melbourne and Barts Cancer Institute. He combines hands-on pipeline development, machine learning, and automated workflow design to deliver actionable patient reports and single-cell atlases. Trained to PhD level in bioinformatics, Jacek is especially adept at mining public cohorts (TCGA/ICGC) to enrich project data—a skill that helps translate large-scale sequencing data into practical insights for translational research.
9 years of coding experience
8 years of employment as a software developer
Master of Science (MS), Applied Bioinformatics, Master of Science (MS), Applied Bioinformatics at Cranfield UniversityBachelor of Science (BS), Molecular and Cellular Biology, Bachelor of Science (BS), Molecular and Cellular Biology at The University of HuddersfieldBachelor of Science (BS), Biotechnology, Bachelor of Science (BS), Biotechnology at Uniwersytet Śląski w KatowicachDoctor of Philosophy (PhD), Bioinformatics, Doctor of Philosophy (PhD), Bioinformatics at Queen Mary, U. of London
English, Polish
Github Skills (12)
bioinformatics10
pipeline9
seq4
evolution2
variants2
r-package2
visualization2
transcriptomics2
python2
machine-learning1
javascript1
data-science1
Programming languages (2)
Github contributions (5)
umccr/MAF-summary
May 2018 - Nov 2021
Contributions:572 commits, 240 pushes, 1 branch in 3 years 6 months
JMarzec/PIXdb
Feb 2018 - Feb 2022
Contributions:43 pushes, 1 branch in 4 years 1 month
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