Jalal Siddiqui
Senior Bioinformatics Scientist
Columbus, Ohio, United States
Summary
👤
Senior🎓
Top SchoolJalal Siddiqui is a Senior Bioinformatics Scientist with a PhD in Biophysics and over a decade of experience turning complex biological data into actionable insights using R, Python, MATLAB, and SQL. His work spans academic and industry settings—modeling cardiac physiology during his doctorate, developing statistical and bioinformatics methods for cancer multi-omics in postdoctoral training, and building NGS pipelines for oncology, virology, and transplant biology in industry. He has authored 20+ publications, presented at multiple conferences, and consistently delivered reproducible pipelines and tools that bridge research and clinical applications. Skilled in machine learning, deep learning, and single-cell RNA-seq, he combines rigorous quantitative modeling with practical pipeline engineering. Based in Columbus, Ohio, he brings both commercialization exposure from technology transfer experience and a track record of translating high-throughput data into publishable and deployable results. Notably, his background in biophysics gives him an uncommon strength in mechanistic modeling alongside modern bioinformatics.
9 years of coding experience
15 years of employment as a software developer
B.A.,B.S.,M.Eng, Chemical Engineering, B.A.,B.S.,M.Eng, Chemical Engineering at Cornell UniversityDoctor of Philosophy (PhD), Biophysics, Doctor of Philosophy (PhD), Biophysics at The Ohio State University
English
Github Skills (25)
d3-heatmap9
dendextend9
dendrogram9
heatmap8
r7
seq7
cran7
rna-seq7
bioinformatics6
bcftools5
plotly5
classifier5
r-package5
python4
dna-sequences4
Programming languages (7)
Github contributions (5)
Mathelab/IntLIM
Jul 2017 - Oct 2018
Contributions:104 commits, 1 PR, 75 pushes in 1 year 3 months
jalalsiddiqui/EffTroponinIConcModel
Feb 2018 - Aug 2021
Contributions:7 pushes, 1 branch in 3 years 6 months
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