Jared Galloway
Bioinformatics Specialist II
Bozeman, Montana, United States
Summary
👤
Senior🎓
Top SchoolJared Galloway is a bioinformatics specialist and data scientist with nine years of experience translating noisy biological data into reproducible, publication-ready analyses and visualizations. Based at Fred Hutch, he builds end-to-end pipelines and ML methods—ranging from Nextflow and Nextstrain deployments for genomic surveillance to neural-network epistasis models and scalable phylogenetic fitness estimators applied to millions of viral genomes. His work blends rigorous software engineering with product-minded design, producing intuitive visual tools (streamlit apps, feature-rich trees) and high-performance pipelines that have supported multiple publications. Jared also mentors researchers across skill levels and has driven best-practice data management for HPC and cloud environments, reflecting a rare combination of algorithmic depth and operational experience.
9 years of coding experience
3 years of employment as a software developer
Master of Science - MS, Biology, Master of Science - MS, Biology at University of Oregon
Github Skills (75)
evolutionary10
seq10
immunology10
slim10
genomics10
simulate10
genetic10
organize10
merge10
simulation10
genetics10
population-genetics10
systems-biology9
datasets9
phylogenetics9
Programming languages (8)
Github contributions (5)
jgallowa07/Spot-Detection
Oct 2019 - Jan 2020
Contributions:98 commits, 5 pushes, 1 branch in 3 months
matsengrp/phip-flow
Mar 2020 - Oct 2022
A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets
Contributions:5 releases, 12 reviews, 104 commits in 2 years 7 months
workflownextflow-pipelinepipelineorganizenextflow
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