Javier Almonacid

Postdoctoral Researcher at George Mason University

Virginia, Canada
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Summary

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Senior
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Javier Almonacid is a Ph.D. research scientist in Applied and Computational Mathematics with a decade of experience building high-performance simulation software and numerical algorithms in C++, Python, and MATLAB. He led the design and optimization of a C++-based 3D musculoskeletal simulation framework (Flexodeal), refactoring large codebases to accelerate elastodynamics and integrate experimental validation, bridging computational models with physiological practice. His work spans biomechanics, plasma dynamics, and multiphysics optimization, combining rigorous PDE analysis with software engineering best practices like modularity, parallelism (OpenMP/MPI), and reproducibility. Javier has a strong teaching and mentoring record—running courses and workshops for hundreds of students—and has collaborated internationally (including a research visit to Oxford), which informs his multidisciplinary, team-oriented approach. Notably, he pairs deep theoretical insight with hands-on optimization of real-world workflows, making his tools both scientifically robust and practically deployable.
code11 years of coding experience
job8 years of employment as a software developer
bookBachelor of Engineering - BE Mathematical Engineering, Bachelor of Engineering - BE Mathematical Engineering at Universidad de Concepción
bookDoctor of Philosophy - PhD Applied and Computational Mathematics, Doctor of Philosophy - PhD Applied and Computational Mathematics at Simon Fraser University
languagesSpanish, English, French
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Github Skills (1)

3d-models8

Programming languages (2)

C++Jupyter Notebook

Github contributions (5)

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sfu-nml/flexodeal

Nov 2024 - Mar 2026

The main site of the Flexodeal library.
Contributions:7 releases, 1 review, 5 PRs in 1 year 3 months
sfu-nml/flexodeal-lite

Mar 2024 - Jun 2026

A simplified, tutorial-like, all-in-one-code version of the Flexodeal library.
Contributions:14 releases, 13 PRs, 104 pushes in 2 years 3 months
3d-modelsdealiifinite-element-methodsmusculoskeletal-simulationsskeletal-muscle
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