Jeffrey Thompson
Associate Vice Chancellor Of Research Data And Analytics
Kansas City, Kansas, United States
Summary
👤
Senior🎓
Top SchoolJeffrey Thompson is a data-driven research leader and biostatistician who directs research data and analytics at the University of Kansas Medical Center, with 11 years of experience bridging clinical informatics, genomics, and machine learning. He leads the Curated Cancer Clinical Outcomes Database (C3OD) and co-leads informatics for KU’s Biostatistics and Informatics Shared Resource, translating heterogeneous data—genomic, imaging, and EMR—into prognostic and predictive models for cancer and Alzheimer’s disease. His group specializes in extracting phenotypes from unstructured clinical notes using deep learning, pairing methodological rigor from his PhD in Quantitative Biomedical Science with operational expertise as Chief Research Informatics Officer. Earlier work includes computational genomics research and founding a health-focused database startup, reflecting a rare blend of academic leadership and product-minded engineering.
11 years of coding experience
4 years of employment as a software developer
Doctor of Philosophy - PhD Quantitative Biomedical Science, Doctor of Philosophy - PhD Quantitative Biomedical Science at Dartmouth CollegeBachelor's Degree Computer Science, Bachelor's Degree Computer Science at University of Southern Maine
Github Skills (10)
rna-seq10
seq10
normalizing10
comparable10
package9
r-package9
bioinformatics8
r8
data-processing8
testing3
Programming languages (1)
Github contributions (5)
greenelab/TDM
Jun 2018 - Apr 2022
R package for normalizing RNA-seq data to make them comparable to microarray data.
Contributions:6 commits, 4 PRs, 16 pushes in 3 years 9 months
r-packagecomparablernaseqdata-processingmicroarray-data
jeffreyat/PrettyMod
Jul 2020 - Jun 2021
Contributions:16 pushes, 1 branch in 10 months
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