Jiadong Lin

Postdoctoral Researcher at University of Washington

Seattle, Washington, United States
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Summary

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Jiadong Lin is a postdoctoral researcher in Seattle with a decade of experience at the intersection of machine learning and computational genomics, focused on algorithms for structural variant detection and variation/graph genomes. He combines deep learning for genomics and pathology images with classical methods like random forests, AdaBoost, and sequential pattern mining to tackle noisy biological and time-series data. His work spans academia and industry research projects—including algorithmic contributions that improved classifier AUCs by 2–7% during a University of Michigan collaboration—and bridges theory and practical tool-building in Python, C++ and Java/.NET. Trained with dual PhD affiliations and a strong CS and engineering foundation, he brings a rare blend of algorithmic rigor and hands-on systems programming to large-scale genomic variation problems.
code10 years of coding experience
job1 year of employment as a software developer
bookDoctor of Philosophy - PhD, Bioinformatics and Computational Biology, Doctor of Philosophy - PhD, Bioinformatics and Computational Biology at Leiden University
bookBachelor's Degree, Electrical and Electronics Engineering, Bachelor's Degree, Electrical and Electronics Engineering at Xidian University
bookDoctor of Philosophy, Bioinformatics and Computational Biology, Doctor of Philosophy, Bioinformatics and Computational Biology at Xi'an Jiaotong University
bookMaster's Degree, Computer Science, Master's Degree, Computer Science at Michigan State University
languagesEnglish, Chinese
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Github Skills (63)

genome10
structural-variation10
caller10
genomics10
dotplot9
graph9
sequencing9
bioinformatics9
rna-seq8
neat8
bioconda8
depth8
cancer-genomics7
spark-ml7
phasing7

Programming languages (8)

JavaC++CRustTeXHTMLCythonPython

Github contributions (5)

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xjtu-omics/SVision

Feb 2021 - Nov 2022

Contributions:13 releases, 98 commits, 92 pushes in 1 year 9 months
jiadong324/Mako

Jan 2020 - Mar 2021

Contributions:1 release, 42 pushes, 1 branch in 1 year 2 months
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Jiadong Lin - Postdoctoral Researcher at University of Washington