Jimmy Caroli
Senior Software Engineer at Amgen
Copenhagen, Capital Region of Denmark
Summary
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Senior🎓
Top SchoolJimmy Caroli is a Senior Software Engineer with a strong bioinformatics and computational biology background, currently applying full-stack development skills to GPCRdb work and now at Amgen. With a PhD and postdoctoral experience in molecular and regenerative medicine, he has a track record of translating research into open-source tools—most notably APTANI/APTANI2 for aptamer selection (published in Bioinformatics) and a Genomics and Drugs Integrated Analysis web server. He blends software design, web engineering, and emerging machine learning/deep learning techniques aimed at pharmacogenomics and drug repositioning. Based in Copenhagen, he brings five years of focused experience bridging academia and industry and a knack for turning complex biological problems into practical, well-documented computational services. A curious coder who jokes about being a "small town boy in a bioinfo world," he pairs scientific rigor with production-oriented engineering.
5 years of coding experience
5 years of employment as a software developer
Laurea Magistrale LM Biotecnologie, Laurea Magistrale LM Biotecnologie at Università degli Studi di Modena e Reggio Emilia
English, Italian
Github Skills (14)
bioinformatics10
open-science10
drug-discovery10
backbone10
cheminformatics10
prediction7
venn5
venn-diagram3
proportional2
r-package2
rna-seq2
seq2
euler2
javascript1
Programming languages (4)
Github contributions (5)
Jimmy-A-Caroli/gpcrdb_data
Sep 2021 - Mar 2025
Contributions:31 pushes in 3 years 6 months
cheminformaticsreference-datavisualisationdrug-discoverycoupled
Jimmy-A-Caroli/protwis
Feb 2021 - Apr 2025
Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G protein-coupled receptors (GPCRs).
Contributions:2 PRs, 596 pushes, 38 branches in 4 years 2 months
cheminformaticsreference-databackbonevisualisationdrug-discovery
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