João Cardoso

Principal Data Engineer

Copenhagen, Capital Region of Denmark
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Summary

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Senior
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Top School
João Cardoso is a Principal Data Engineer based in Copenhagen with 12 years of experience bridging data science, bioengineering research and production analytics. He holds a PhD in Bioengineering and Synthetic Biology from DTU and has a strong track record applying constraint-based modeling and optimization to metabolic engineering problems, from academic retrobiosynthesis algorithms to industry-grade data products. João blends hands-on Python engineering, machine learning and data management with leadership roles including scrum master and technical scouting at Novozymes and consulting at BASE life science. He consistently translates complex biological models into scalable software and analytics pipelines, enabling teams to move discoveries from in silico design to operational insight. An early contributor to metabolic modeling tooling, he brings uncommon depth in both algorithm development and practical deployment of bioinformatics-driven solutions.
code11 years of coding experience
job9 years of employment as a software developer
bookBSc Biociences - Bioinformatics, BSc Biociences - Bioinformatics at Universidade Católica Portuguesa
bookMSc Bioninformatics, MSc Bioninformatics at Universidade do Minho
bookTechnical University of Denmark
languagesPortuguese, English
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Github Skills (62)

simulation10
sympy10
mathematical10
optimization10
flask-api9
mathematical-programming9
flask-application9
bioinformatics9
constraint9
python-client9
sbml9
mongoengine9
marshmallow9
computational-biology9
systems-biology9

Programming languages (4)

ShellJavaScriptJupyter NotebookPython

Github contributions (5)

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biosustain/marsi

Apr 2017 - Feb 2018

Contributions:328 pushes, 2 branches, 15 tags in 10 months
opencobra/driven

Apr 2015 - Oct 2016

Data-Driven Constraint-based analysis
Contributions:101 commits, 1 PR, 36 pushes in 1 year 5 months
constraint-based-analysisdata-drivenconstraintconstraint-programming
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João Cardoso - Principal Data Engineer