John Goertz

Principal Scientist at PyMC Labs

Danbury, Connecticut, United States
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Summary

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John Goertz is a Principal Scientist and founder with 11 years of experience at the intersection of machine learning, bioinformatics, and experimental bioengineering, currently leading CRISPR integration and data-science efforts in industry. He co-founded and served as Chief Scientific Officer of Signatur Biosciences (YC S22), where he invented a hypermultiplexed qPCR molecular design strategy and drove a machine-learning-led workflow that enabled nearly 1,000 experiments by a single technician and raised over $5M. His toolkit spans graph neural networks, Bayesian optimization, PyTorch/PyG, PyMC/Botorch, and a 30,000-line Python codebase tied to a 50M-row PostgreSQL experimental database—skills he used to optimize 42-component molecular kits and tune primer sets at scale. He pairs hands-on wet-lab execution with production-grade MLOps and automation design, having moved a breast cancer prognostic kit from research toward development. Known for stretching limited resources into high-throughput, high-quality experimental data, he thrives building small, distributed teams that translate probabilistic ML into deployable diagnostics.
code11 years of coding experience
job8 years of employment as a software developer
bookBachelor of Science (BS) Physics, Bachelor of Science (BS) Physics at Seattle University
bookDoctor of Philosophy (PhD) Bioengineering, Doctor of Philosophy (PhD) Bioengineering at University of Maryland
languagesEnglish, German
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Stackoverflow

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Github Skills (92)

probabilistic-programming10
python10
mcmc10
bayesian-inference10
variational-inference10
bayesian10
probabilistic-models10
bayesian-statistics10
statistical-inference10
probabilistic10
modeling10
process-model9
swarm-intelligence9
regression9
particle-swarm-optimization9

Programming languages (4)

TypeScriptPHPHTMLPython

Github contributions (5)

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JohnGoertz/PythonUtils

Aug 2019 - Jan 2021

Contributions:29 pushes, 3 branches in 1 year 5 months
JohnGoertz/Gumbi-docs

Nov 2021 - Nov 2021

Documentation for Gumbi
Contributions:6 PRs, 31 pushes, 3 branches in 1 day
docstringidris
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John Goertz - Principal Scientist at PyMC Labs