John Greeley

Head Of Engineering at Boston Lighthouse Innovations

Somerville, Massachusetts, United States
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Summary

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John Greeley is Head of Engineering with 11 years of experience building full-stack bioinformatics platforms that turn clinical genomics data into production-tested diagnostic workflows. Based in Somerville, MA, he leads engineering at Boston Lighthouse Innovations, collaborating with Mass General Hospital to deploy next-generation sequencing labs and scalable reporting pipelines for global health systems. Trained in biochemistry, neuroscience, and bioinformatics (Williams College, Northeastern, Harvard Extension), he blends wet-lab understanding with software and systems engineering to prioritize reproducibility and operational rigor. His background ranges from SOA/ESB integration to hands-on bioinformatics, giving him a pragmatic knack for integrating legacy systems with modern data science tooling. Notably, he focuses on durable, auditable research platforms that bridge academic analysis and regulated clinical production.
code11 years of coding experience
bookMaster’s Degree, Bioinformatics, Master’s Degree, Bioinformatics at Northeastern University
bookContinuing Education, Computer Science, Biotechnology & Bioinformatics, Continuing Education, Computer Science, Biotechnology & Bioinformatics at Harvard Extension School
bookBachelor of Arts (B.A.), Biochemistry and Molecular Biology, Neuroscience, Biology, Psychology, Bachelor of Arts (B.A.), Biochemistry and Molecular Biology, Neuroscience, Biology, Psychology at Williams College
languagesEnglish
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Stats
131reputation
73kreached
2answers
1question
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Github Skills (38)

client-library10
package-management10
wikipedia10
conda10
forge10
mediawiki-api10
python-client10
bioinformatics10
bioconda10
mediawiki9
conda-forge9
api9
genome8
bedtools8
python7

Programming languages (5)

ShellCLuaPerlPython

Github contributions (5)

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JohnGreeley/conda-centos5

Nov 2016 - Dec 2016

Contributions:99 pushes, 1 branch in 1 month
JohnGreeley/mwclient

Jul 2017 - Jun 2019

mwclient is a Python framework to interface with the MediaWiki API.
Contributions:5 pushes, 3 branches, 1 tag in 1 year 11 months
apipythonmediawiki-apipython-frameworkmediawiki
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John Greeley - Head Of Engineering at Boston Lighthouse Innovations