Jonas Hartmann
Postdoctoral Researcher at University College London
Stony Stratford, England, United Kingdom
Summary
👤
Senior🎓
Top SchoolJonas Hartmann is a systems biologist and postdoctoral researcher with a decade of experience probing cellular self-organization and collective behavior, currently studying how cell shape and fate interact during vertebrate neural crest development at UCL. He blends quantitative microscopy, precision perturbations, and data-science-driven modeling to reveal principles that can predict and ultimately design multicellular outcomes. His career spans experimental and theoretical posts at EMBL, Northwestern and Heidelberg, where he distilled unifying concepts of tissue-level behavior and applied cutting-edge techniques like optogenetics and machine-learning image analysis. Notably, he began his professional life as an apprentice chef, a background that surfaces in his practical, iterative approach to lab work and mentoring.
11 years of coding experience
1 year of employment as a software developer
Bachelor of Science (BS), Bachelor of Science (BS) at University of Applied Sciences and Arts Northwestern Switzerland FHNWMaster of Science, Master of Science at Universität ZürichDoctor of Philosophy (PhD), Doctor of Philosophy (PhD) at Heidelberg UniversityVocational Diploma (Berufsmaturität), Vocational Diploma (Berufsmaturität) at Strickhof Lindau
English, German, German
Stackoverflow
1,448reputation
134kreached
26answers
1question
matplotlib
top-5%
python
top-5%
Github Skills (25)
biological-data-analysis10
jupyter9
image-processing9
matplotlib9
biology9
python9
jupyterlab9
image-analysis9
scikit-image9
single-cell-analysis9
bioinformatics9
transcriptomics9
scanpy8
machine-learning7
boxplot6
Programming languages (4)
Github contributions (5)
WhoIsJack/tissue_exploder
Dec 2015 - Jul 2023
Contributions:1 release, 14 pushes, 3 branches in 7 years 8 months
WhoIsJack/python-bioimage-analysis-tutorial
Jun 2021 - Jul 2022
A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.
Contributions:7 commits, 1 PR, 11 pushes in 1 year
pythonimage-analysisimage-processingbiologybiological-data-analysis
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