Jordi Deu-pons
Staff Software Engineer at Seqera
Barcelona, Catalonia, Spain
Summary
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Rockstar🎓
Top SchoolJordi Deu-pons is a Staff Software Engineer based in Barcelona with 16 years of experience building backend systems, DevOps pipelines, and cloud integrations for bioinformatics and infrastructure projects. Currently at Seqera, he progressed from Senior to Staff Engineer while contributing to Nextflow—an influential DSL for computational pipelines—where he improved GitLab integration, config variable binding, Tower reporting, and Google Batch/Fusion cloud support. His background blends biology, bioinformatics, and computer science, informing pragmatic solutions for genomics workflows and research software. Jordi also holds postgraduate credentials in bioinformatics and a master's in cybersecurity and privacy, reflecting a dual focus on data-intensive science and secure, reliable systems. Colleagues rely on him to translate complex research needs into production-grade, testable infrastructure and tooling.
16 years of coding experience
21 years of employment as a software developer
Computer Science, Computer Science at Universitat Autònoma de BarcelonaBiology General, Biology General at Universitat Pompeu FabraUOC (Universitat Oberta de Catalunya)
Catalan, Spanish, English
Stackoverflow
31reputation
3kreached
1answer
1question
Github Skills (17)
docker10
groovy10
configuration-management10
dockers10
pipeline-framework10
cloud-computing9
aws9
automations8
automation8
gitlab8
testing8
scripting7
script7
sh7
shell7
Programming languages (14)
Github contributions (5)
nextflow-io/nextflow
Mar 2021 - Nov 2022
A DSL for data-driven computational pipelines
Role in this project:
Back-end Developer & DevOps Engineer
Back-end Developer & DevOps EngineerContributions:86 reviews, 27 commits, 26 PRs in 1 year 8 months
Contributions summary:Jordi primarily contributed to the back-end logic of the Nextflow pipeline framework, focusing on improvements to the GitLab integration by encoding path parameters. They also introduced variable binding capabilities within the configuration parameters, which included changes to the config builder and associated testing. Furthermore, they enhanced the project with support for Tower reports, including the implementation of a plugin and necessary file handling. The user also worked on cloud/infrastructure configurations, specifically relating to Google Batch and Fusion setups within the Nextflow framework.
singularity-containersbioinformaticsawsdataflowslurm
seqeralabs/tower-cli
Jul 2021 - Dec 2022
Nextflow Tower CLI tool
Contributions:3 releases, 169 reviews, 360 commits in 1 year 4 months
pythonnextflow-towernextflowcli-tooltower
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