Jose Castruita

Bioinformatics Scientist

Copenhagen, Capital Region of Denmark
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Summary

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Senior
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Top School
Jose Castruita is a Bioinformatics Scientist based in Copenhagen with 11 years of experience combining evolutionary genomics and applied bioinformatics in hospital and academic settings. After earning a PhD in Evolutionary Genomics from the University of Copenhagen and a genomics bachelor from UNAM, he progressed through PhD and postdoctoral roles into a clinical bioinformatics scientist role at Amager og Hvidovre Hospital. His work bridges fundamental evolutionary genomic research and translational bioinformatics, evidenced by a complete publication record and ORCID profile. Jose brings practical experience deploying research insights into clinical pipelines, and maintains an academic footprint that suggests deep expertise in comparative genomics and large-scale sequence analysis. An unspoken strength is his sustained presence across Denmark–Mexico scientific networks, enabling cross-disciplinary collaboration and knowledge transfer.
code11 years of coding experience
job3 years of employment as a software developer
bookUniversidad Nacional Autónoma de México (UNAM)
bookDoctor of Philosophy (Ph.D.), Evolutionary Genomics, Doctor of Philosophy (Ph.D.), Evolutionary Genomics at Københavns Universitet
languagesSpanish, English, Danish
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Github Skills (9)

bioinformatics6
genomics6
sequencing6
next-generation-sequencing5
genome4
scheme4
htslib3
throughput1
clustering1

Programming languages (4)

C++CJupyter NotebookPython

Github contributions (5)

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SamaZYX/odintifier

Mar 2015 - Oct 2015

Contributions:3 commits, 13 pushes, 4 comments in 7 months
SamaZYX/assay-template

Oct 2023 - Oct 2023

This is a cookiecutter template for NGS assay data. This template was made for a workshop at DTU in October 2023
Contributions:4 pushes in 1 day
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Jose Castruita - Bioinformatics Scientist