Joseph Min
Infrastructure Engineer at Arc Institute
Mountain View, California, United States
Summary
🤩
Rockstar🎓
Top SchoolJoseph Min is an infrastructure-focused software engineer with nine years of experience building cloud-native pipelines and production orchestration for computational biology and analytics. He holds an MS from MIT and a BS from Caltech, and has driven large-scale ETL, NGS, and analysis execution pipelines on AWS and Airflow across roles at Ginkgo Bioworks, Haus, and research labs. At Ginkgo he climbed from intern to technical lead, improving throughput and reliability for thousands of daily jobs, and at Haus he designed a customer-facing “landing zone” that enforces data quality and provides actionable feedback. Now based in Mountain View, he blends deep bioinformatics domain experience with practical infrastructure engineering, often working at the intersection of research-scale datasets and production systems. Notably, his academic work includes tooling for single-cell and spatial transcriptomics and handling terabyte-scale multimodal data in distributed environments.
9 years of coding experience
9 years of employment as a software developer
Master of Science - MS Computer Science, Master of Science - MS Computer Science at Massachusetts Institute of TechnologyCalifornia Institute of Technology
English, Korean
Github Skills (114)
near10
taxonomy10
python10
spatial-transcriptomics10
seq10
structural-variation10
etl10
automation10
mlops10
transcriptomics10
spatial10
computational-biology10
gff10
orchestration10
python-scripts10
Programming languages (7)
Github contributions (5)
Lioscro/fbgbp
Dec 2021 - Mar 2022
Optimized belief propagation on arbitrary graphs with binary states.
Contributions:46 commits, 20 PRs, 41 pushes in 3 months
propagationmarkov-random-fieldarbitrarygraphsbelief-propagation
aristoteleo/dynast-release
Oct 2020 - Jul 2022
Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments
Contributions:7 releases, 269 commits, 12 PRs in 1 year 9 months
splicingnasc-seqrna-velocitymetabolic-labelingresolved
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