Julia Ponomarenko - Head Of Bioinformatics Core

Julia Ponomarenko

Head Of Bioinformatics Core

Barcelona, Catalonia, Spain

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Summary

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Senior

🎓

Top School

Julia Ponomarenko is a bioinformatics leader with over 20 years of experience directing multidisciplinary teams and delivering high-impact computational resources for immunology, genomics, and structural biology. As Head of the CRG Bioinformatics Core she has guided reproducible, cloud-native pipelines and training across 600+ projects and 200+ groups, while co-leading the Immune Epitope Database’s 3D efforts and securing NSF/NIH funding. Her work uniquely combines physics-rooted rigor and systems biology intuition to pioneer methods for regulatory SNP impact and DNA-structure-informed TF binding prediction. A seasoned mentor and communicator, she translates complex computational results for experimentalists and managers alike and thrives in energetic teams that produce tangible, reproducible outcomes.

9 years of coding experience

11 years of employment as a software developer

High School, Graduated first in the class., High School, Graduated first in the class. at ФМШ / Novosibirsk Physico-Mathematical School

Doctor of Philosophy (Ph.D.), Biology, Doctor of Philosophy (Ph.D.), Biology at Institute of Cytology & Genetics, Novosibirsk, Russia

Master’s Degree, Physics, Master’s Degree, Physics at Novosibirsk State University (NSU)

English, Russian

Github Skills (34)

immunology10

sequencing10

rna-seq10

extraction9

single-cell-analysis9

bioinformatics9

genomics9

tibble7

tidyverse7

nextflow7

tsne7

tidy7

tidymodels7

pipeline5

Programming languages (6)

DockerfileRC++NextflowKotlinPython

Github contributions (5)

biocorecrg/microbiome_procedures

Nov 2018 - Apr 2022

Contributions:25 commits, 9 pushes in 3 years 5 months

biocorecrg/SIB_course_nextflow_Nov_2021

Sep 2021 - Nov 2021

Nextflow course 2021

Contributions:89 commits, 34 pushes in 2 months

nextflowworkflow

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