Julianne David
Senior Computational Biologist
Portland, Oregon Metropolitan Area United States
Summary
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Senior🎓
Top SchoolJulianne David is a Senior Computational Biologist in the Portland area with nine years of experience turning large-scale RNA-seq datasets into actionable cancer biomarkers. She specializes in discovering cancer-specific splicing events and peptide targets for early detection and immunotherapy, and she recently advanced statistical models for confident calling of novel transcripts. Her work spans GTEx, TCGA, CCLE and SRA resources, plus curation of benchmarking datasets and experimental validation of splicing-derived peptides. A collaborative researcher by training (PhD in Computational Biology from OHSU), she has bridged multi-institutional teams and shifted methods from theoretical development to practical biomarker discovery. Notably, she pairs deep computational rigor with hands-on assay validation, making her effective at moving discoveries toward clinical relevance.
9 years of coding experience
11 years of employment as a software developer
Doctor of Philosophy - PhD, Computational Biology, Doctor of Philosophy - PhD, Computational Biology at Oregon Health & Science UniversityMaster of Science - MS, Chemistry, Master of Science - MS, Chemistry at Northwestern UniversityUniversity of Illinois Laboratory High School
Stackoverflow
1reputation
0reached
1answer
0questions
Github Skills (23)
anaconda6
python6
genomes6
git6
seq5
normal4
bioinformatics4
sequence4
pipeline3
assembler3
gene-expression3
embedding3
molecule3
dataframe2
pandas-dataframe2
Programming languages (3)
Github contributions (5)
JulianneDavid/shared-cancer-splicing
Aug 2019 - May 2020
Code for reproducing analyses and figures for shared alternative cancer splicing paper
Contributions:75 commits, 44 pushes, 1 branch in 8 months
JulianneDavid/JulianneDavid.github.io
Sep 2020 - Sep 2023
Live GitHub Page at
Contributions:36 pushes in 2 years 11 months
react
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