Justin Bedo

Stafford Fox Centenary Fellow at Walter and Eliza Hall Institute of Medical Research

Melbourne, Victoria, Australia
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Summary

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Rockstar
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Justin Bedo is a research-focused software engineer and computational biologist with 12 years of experience bridging academic and industry research, currently a Stafford Fox Centenary Fellow at the Walter and Eliza Hall Institute in Melbourne. He holds a PhD in Engineering from ANU and has a track record of solving complex bioinformatics problems from roles at IBM, NICTA, CNRS, and university research fellowships. Justin combines systems and software engineering experience (including early sysadmin work) with deep expertise in next-generation sequencing analysis and translational research workflows. He is comfortable moving between prototyping research code and production-grade tools, enabling reproducible analysis in interdisciplinary teams. A less obvious strength is his sustained presence across both national research institutes and international labs, which gives him a pragmatic perspective on deploying computational methods in real-world biomedical projects.
code12 years of coding experience
job10 years of employment as a software developer
bookAustralian National University
languagesEnglish, French
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Github Skills (142)

variants10
nix10
bug-reporting10
genomics10
nixos10
linux10
reduction10
nixpkgs10
phasing10
bioinformatics10
singularity9
reproducible-science9
portable9
shake9
pipeline9

Programming languages (15)

JavaC++CRustGoHTMLDockerfileR

Github contributions (5)

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jbedo/static-nix

Feb 2021 - Nov 2022

Contributions:51 commits, 19 pushes, 2 branches in 1 year 9 months
PapenfussLab/bionix

Sep 2018 - Nov 2022

Functional highly reproducible bioinformatics pipelines
Contributions:343 commits, 3 PRs, 181 pushes in 4 years 3 months
pipelinecondasingularitygenomicsreproducible
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Justin Bedo - Stafford Fox Centenary Fellow at Walter and Eliza Hall Institute of Medical Research