Katarína Grešová
Postdoctoral Researcher at Max Delbrück Center
Berlin, Germany
Summary
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Senior🎓
Top SchoolKatarína Grešová is a postdoctoral machine learning researcher with nine years of experience applying deep learning to genomics and structural biology, currently working on protein structure analysis and genomic sequence classification at the Max Delbrück Center in Berlin. She builds end-to-end ML solutions—from scalable HPC pipelines and production deployments to model interpretation—bridging computational rigor with biological insight. Her work includes developing Genomic Benchmarks and miRBench, publishing novel interpretation methods (e.g., Attribution Sequence Alignment), and leading workshops that train researchers in deep learning and XAI for biology. With international stints at NIH, University of Malta, and industry roles integrating vision and NLP systems, she blends academic depth (PhD in Genomics and Proteomics) with practical engineering chops across Python and C++ codebases. Colleagues value her technical leadership and mentorship, and she is open to collaborations that translate ML advances into real-world healthcare and biology applications.
9 years of coding experience
7 years of employment as a software developer
PhD Genomics and Proteomics, PhD Genomics and Proteomics at Masarykova univerzitaMaster's degree Bioinformatics and biocomputing, Master's degree Bioinformatics and biocomputing at Brno University of Technology
English, Slovak, Czech
Stackoverflow
1reputation
0reached
0answers
0questions
Github Skills (21)
genomics10
pytorch9
classification9
bioinformatics9
deep-learning8
tensorflow8
bezier3
semantic3
c-library3
organize3
verify3
geometry2
cpp2
gnome2
fastai2
Programming languages (5)
Github contributions (5)
katarinagresova/DSIB01_2021
Aug 2021 - Oct 2021
Contributions:194 pushes, 1 branch in 1 month
ML-Bioinfo-CEITEC/genomic_benchmarks
Sep 2021 - Jun 2022
Benchmarks for classification of genomic sequences
Contributions:1 release, 2 reviews, 122 commits in 9 months
pytorchdeep-learninggenomics-datadatasetgenomics
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