Konrad Rokicki
Engineering Manager at HHMI (JaneliaSciComp)
Reston, Virginia, United States
Summary
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SeniorKonrad Rokicki is an Engineering Manager with 15 years delivering software for scientific research, currently leading teams at Janelia Research Campus (HHMI) from his base in Reston, Virginia. He blends hands-on engineering in containerized pipelines, high-performance n-tier systems, and cloud-native services with practical data modeling and distributed systems design. Known for rapid prototyping, he moves ideas from concept to production including mobile/tablet interfaces and scalable computational workflows. He pairs technical leadership with a researcher-focused mindset, optimizing tools that accelerate scientific discovery rather than just building infrastructure. When not managing teams, he focuses on data management patterns that make complex scientific datasets more accessible and actionable.
14 years of coding experience
English, Polish
Github Skills (157)
aws-services10
dataflow10
slurm10
spatial-transcriptomics10
pipeline-framework10
datasets10
transcriptomics10
scientific-computing10
reproducible-science10
singularity10
nextflow10
docker-swarm10
pipeline10
groovy10
dsl10
Programming languages (16)
Github contributions (5)
JaneliaSciComp/zarrcade
Mar 2024 - Jan 2025
Create web-based OME-Zarr galleries
Contributions:3 releases, 4 PRs, 75 pushes in 10 months
microscopy-imagesome-zarrwebapp
JaneliaSciComp/jacs-tools-docker
Apr 2020 - Jun 2024
Contributions:1 release, 27 pushes, 2 tags in 4 years 2 months
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