Konstantinn Bonnet
PHD Student at University of Düsseldorf
Dusseldorf, North Rhine-Westphalia, Germany
Summary
👤
Senior🎓
Top SchoolKonstantinn Bonnet is a PhD student and systems programmer with over seven years of hands-on experience on Unix-like systems and decades of overall technical experience, blending low-level development with system administration. He combines strong bioinformatics and data science skills—statistical modeling, machine learning, big-data processing—with practical biomedical knowledge gained through medical studies and hospital internships. His research and internships span breast cancer transcriptomics, multi‑omic regulation, metabolic engineering, and performance optimization of targeted assembly pipelines, often coupling algorithmic rigor with UI or pipeline engineering. Comfortable across C/Unix toolchains and data-heavy research, he is particularly interested in optimization, algorithmics, mathematical modeling of biological processes, and game programming. Known on GitHub as a pragmatic contributor to 9front and Unix tools, he brings an unusually broad mix of clinical insight, computational biology, and low-level systems expertise.
38 years of coding experience
1 year of employment as a software developer
Master's degree, Biomathematics, Bioinformatics, and Computational Biology, Master's degree, Biomathematics, Bioinformatics, and Computational Biology at Université Claude Bernard Lyon 1
Bulgarian, German, English, French
Github Skills (21)
package-management10
headers10
conda10
source-port10
bioinformatics10
indexing9
linux9
windows9
bioconda9
macos9
distro8
cross-platform8
graph-visualization8
package8
binaries8
Programming languages (3)
Github contributions (5)
qwx9/strangepg
Jul 2024 - Jun 2026
strange cross-platform, performance-oriented and interactive pangenome and large graph visualization
Contributions:6 releases, 321 pushes, 4 branches in 1 year 11 months
graph-visualizationcoarseningexternal-memorygfa-formatindexing
qwx9/ft-
Mar 2023 - Nov 2025
Fasttracker II clone for Windows/macOS/Linux/Plan9
Contributions:26 pushes in 2 years 9 months
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