Mahmut Uludag
Software Developer at King Abdullah University of Science and Technology
Thuwal, Makkah Region, Saudi Arabia
Summary
👤
Senior🎓
Top SchoolMahmut Uludag is a software developer with 10+ years of experience building and stabilizing high-volume bioinformatics web services and search platforms. He has significant expertise integrating provenance-rich reference datasets (UniProt, HMDB, ModelSEED) into searchable systems, having implemented Solr and Elasticsearch indexing and aggregation-driven UIs. His background includes hard reliability work at EMBL-EBI and EBI/EMBOSS—fixing concurrency, memory leaks, and performance bottlenecks—and developing robust web-service APIs and thread-safe server components. At KAUST he combined graph-based metabolite search (pathcre8) with user-facing interfaces, bridging computational annotations and researcher workflows. Comfortable across Java, search engines, and legacy-to-modern migrations, he excels at turning research outputs into production-ready, searchable resources. Colleagues can expect a pragmatic engineer who prioritizes stability and thoughtful integration of complex biological data.
10 years of coding experience
23 years of employment as a software developer
MSc, Computer Engineering, MSc, Computer Engineering at Middle East Technical UniversityPhD, Computer Engineering, PhD, Computer Engineering at Eastern Mediterranean University
English, Turkish
Stackoverflow
3reputation
0reached
0answers
0questions
Github Skills (106)
graph-algorithms10
graph-visualization10
identifier10
network-analysis9
operation9
blast9
python9
ontology9
graph-theory9
complex-networks9
cycle9
graph-analysis9
science8
doi8
protein-sequences8
Programming languages (8)
Github contributions (5)
uludag/nosql-biosets
Nov 2016 - Oct 2022
Contributions:359 commits, 267 pushes, 1 branch in 6 years
uludag/hspsdb-webcode
Aug 2016 - Mar 2018
Contributions:36 pushes, 2 branches, 2 issues in 1 year 6 months
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