Mahsa Yazdani

Bioinformatics Engineer

San Francisco, California, United States
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Summary

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Mahsa Yazdani is a bioinformatics and spatial multiomics scientist with 7 years of interdisciplinary experience bridging wet-lab spatial proteomics/transcriptomics and computational analysis. She has led DBiT-seq studies on human lung and brain organoid tissues, integrated scRNA-seq/CITE-seq datasets, and developed analysis pipelines using R, shell scripting, and Python to drive insights into disease biology and therapeutic screening. Her industry experience includes applying machine learning, deep-learning segmentation (Cellpose), and rigorous benchmarking approaches to Optical Pooled CRISPR screens at Merck, and she has built interactive Streamlit tools to make complex results accessible to biologists. Trained across biomedical engineering, pharmaceutical science, and computer engineering programs, she combines microfluidics and simulation background with spatial omics expertise—a mix that helps translate experimental nuance into robust computational workflows.
code7 years of coding experience
job9 years of employment as a software developer
bookInterdisciplinary Program, Mechanical Engineering/ Pharmaceutical Science, Interdisciplinary Program, Mechanical Engineering/ Pharmaceutical Science at University of Missouri-Kansas City
bookBachelor's degree, Food Science and Technology - Quality Control, Bachelor's degree, Food Science and Technology - Quality Control at Shahid Beheshti University of Medical Sciences
bookDoctor of Philosophy - PhD, Biomedical/Medical Engineering, Doctor of Philosophy - PhD, Biomedical/Medical Engineering at University at Buffalo
bookMaster of Science (MS), Pharmaceutical Engineering, Master of Science (MS), Pharmaceutical Engineering at University of Tehran
languagesEnglish, Persian
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Github Skills (16)

machine-learning10
artificial-intelligence10
ai10
phaser8
rendering8
canvas7
2d-game7
webgl7
javascript7
mobile-web7
html6
game-development6
facebook-instant-games5
reinforcement-learning3
bioconductor3

Programming languages (5)

JavaRJavaScriptJupyter NotebookPython

Github contributions (5)

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mahsayazdani/Webelopers2019

Nov 2019 - Nov 2019

Contributions:13 pushes, 1 branch in 1 day
FatemeAmere/CompilerProject

Jan 2020 - Jan 2020

Contributions:10 pushes in 6 days
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