Mar Gonzalez-porta
ENA & BioSamples Team Lead at European Bioinformatics Institute | EMBL-EBI
United Kingdom
Summary
👤
Senior🎓
Top SchoolMar Gonzalez-porta is a senior bioinformatician and team leader with 13 years’ experience delivering clinical-scale genomics (WGS and PCR) in ISO 15189 and PHMC settings, currently leading the ENA & BioSamples team at EMBL-EBI. He has driven national-scale programs and product development—from building QC pipelines for a 100K-genome initiative to launching long-read pharmacogenomics workflows in industry—and combines hands-on pipeline engineering with regulatory-quality management. His background spans academic innovation in transcriptomics and splicing (PhD, Cambridge) to operational leadership in high-throughput PCR labs during COVID-19, demonstrating an ability to translate research tools into audited clinical practice. Notably, he has contributed to GA4GH standards for WGS benchmarking and developed openly shared QC and visualization tools, reflecting a commitment to reproducible, community-driven genomics.
12 years of coding experience
9 years of employment as a software developer
PhD in Bioinformatics Functional Genomics, PhD in Bioinformatics Functional Genomics at University of CambridgeBSc Biotechnology, BSc Biotechnology at Universitat Rovira i Virgili
English, Catalan, Spanish
Github Skills (33)
seq10
rna-seq10
bioinformatics10
genomics10
npm7
fasta6
pypi6
data-analysis6
bioconda6
reference-implementation6
python6
depth5
fastq5
aggregate5
coverage4
Programming languages (7)
Github contributions (5)
c-BIG/wgs-sample-qc
Feb 2021 - Mar 2022
Repository to host ongoing discussions by GHIF members on developing a reference implementation for QC of WGS results
Contributions:11 commits, 6 PRs, 5 pushes in 1 year
developinghostongoingwgsmembers
mgonzalezporta/tviz
Jan 2014 - Apr 2015
Contributions:30 commits, 1 push in 1 year 3 months
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