Marcel Ramos
Computational Biologist
New York, New York, United States
Summary
🤩
Rockstar🎓
Top SchoolMarcel Ramos is a computational biologist with 11 years of experience building production-ready bioinformatics tools and multi-omics workflows, currently applying his expertise at Tempus and as Senior Data Scientist at CUNY School of Public Health. He develops Bioconductor-based R packages and HPC pipelines to preprocess, curate, and visualize complex datasets like TCGA, with a focus on reproducible multi-omics integration. Marcel blends hands-on software engineering and DevOps—having contributed R build and BiocCheck integration to the travis-ci project—with domain knowledge from an MPH, enabling him to translate public health questions into scalable data products. Based in New York, he’s comfortable navigating technical replicates, metadata harmonization, and large-scale distribution of curated datasets for research use.
11 years of coding experience
Master of Public Health - MPH, Master of Public Health - MPH at CUNY School of Public Health, Hunter CollegeBachelor of Arts - BA, Bachelor of Arts - BA at City University of New York City College
English, French, Spanish, Italian
Github Skills (9)
travis-ci10
cicd10
r10
ruby10
scripting9
bash9
shell9
script9
sh9
Programming languages (23)
Github contributions (5)
travis-ci/travis-build
May 2018 - Nov 2019
.travis.yml => build.sh converter
Role in this project:
Back-end Developer & DevOps Engineer
Back-end Developer & DevOps EngineerContributions:32 commits, 7 PRs, 25 comments in 1 year 5 months
Contributions summary:Marcel primarily contributed to the R build environment within the travis-ci/travis-build repository. Their work focused on incorporating BiocCheck, a tool for checking Bioconductor packages, and managing the build process. These changes included updating the build scripts to use BiocManager, modifying R version handling, and adjusting the integration of the BiocCheck tool within the Travis CI environment. Furthermore, the user has improved the deployment of the code and added a new version for R to build on.
rubytravisymltravis-ciconverter
LiNk-NY/r-appveyor
Oct 2018 - Dec 2022
Tools for using R with AppVeyor (https://appveyor.com)
Contributions:9 pushes, 4 branches in 4 years 3 months
r-packageappveyorrstats
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