Marco Mariotti

Associate Professor (Professor Agregat)

Barcelona, Catalonia, Spain
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Summary

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Senior
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Top School
Marco Mariotti is an associate professor and computational genomics researcher at the Universitat de Barcelona with 11 years of experience bridging evolutionary, molecular and comparative genomics. He leads work on genomic recoding and comparative analyses, having transitioned from postdoctoral roles at Harvard Medical School and the CRG to a Ramón y Cajal group leader and now faculty position. His background combines a PhD in Biomedicine and a Master in Bioinformatics with hands-on computational biology in high-profile labs, giving him both experimental insight and algorithmic expertise. Known for translating evolutionary questions into genomic-scale analyses, he runs a PI lab that integrates coding-recoding evolution with comparative genomics approaches. An international career path—from Italy to Ireland, Spain and the U.S.—underscores his collaborative network and fluency in multidisciplinary genomics.
code11 years of coding experience
job5 years of employment as a software developer
bookHigh School Diploma Science, High School Diploma Science at Liceo Scientifico in Ravenna
bookMaster Bioinformatics, Master Bioinformatics at Alma Mater Studiorum – Università di Bologna
bookDoctor of Philosophy (Ph.D.) Biomedicine, Doctor of Philosophy (Ph.D.) Biomedicine at Universitat Pompeu Fabra
languagesItalian, English, Spanish, French, Catalan
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Github Skills (35)

samtools10
tree-structure10
ncbi10
data-structures10
genomics10
treeview10
genomicranges10
pandas9
visualization9
python9
indexing9
phylogenetics9
bioinformatics9
fasta9
command-line-tool9

Programming languages (4)

ShellCJupyter NotebookPython

Github contributions (5)

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marco-mariotti/pyaln

Jul 2021 - Feb 2024

Read, process, write multiple sequence alignments
Contributions:2 PRs, 20 pushes, 1 branch in 2 years 7 months
sequence-alignment
mariottigenomicslab/pyranges

Jan 2023 - May 2025

Performant Pythonic GenomicRanges
Contributions:1 review, 19 PRs, 31 pushes in 2 years 4 months
pythongenomicrangesgenomicsbioinformaticsperformant
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