Maria Bernard
Ingénieur D'étude En Bioinformatique
Jouy-en-Josas, Ile-de-France
Summary
🤩
Rockstar🎓
Top SchoolMaria Bernard is an experienced bioinformatics engineer with over a decade of expertise in variant calling (WGS, RAD, ASE) and metagenomic amplicon analyses, currently serving as ingénieur d'étude at INRAE in Jouy-en-Josas. She combines hands-on sequencing analysis—from Roche 454 and Sanger to modern Illumina workflows—with a strong background in de novo genome assembly and multi-omics integration developed during roles at CEA and ENS. Her recent doctoral work applied combined metagenomic, metatranscriptomic and 16S approaches to link gut microbiota composition and function to feed efficiency in laying hens, illustrating a rare blend of methodological comparison and practical agricultural impact. Active in the French bioinformatics community, she has served as vice-president of the SFBI and contributes to science communication and editorial work. Notably, her career balances large-scale consortium experience (e.g., TARA Oceans-related analyses and high-profile genome projects) with applied, reproducible pipelines for variant and microbiome studies.
10 years of coding experience
Master's degree, Biomathematics, Bioinformatics, and Computational Biology, Master's degree, Biomathematics, Bioinformatics, and Computational Biology at Université d'Evry-Val d'EssonneDUT, Bioinformatics, DUT, Bioinformatics at Université de Clermont Ferrand- Antenne d'Aurillac
English
Github Skills (59)
docker10
python10
package-management10
data-science10
conda10
workflow-engine10
sequencing10
pipeline10
bioinformatics10
galaxy10
genomics10
science10
depth10
bioconda10
matrix9
Programming languages (9)
Github contributions (5)
geraldinepascal/FROGS-wrappers
Dec 2018 - May 2024
Galaxy wrappers for FROGS
Contributions:13 releases, 52 reviews, 16 PRs in 5 years 6 months
frogsgalaxywrappers
mariabernard/RADSeq
Mar 2016 - Nov 2017
Contributions:51 pushes, 9 branches in 1 year 9 months
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