Mark Bouts

Clinical Data Scientist

Utrecht, Utrecht, Netherlands
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Summary

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Rockstar
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Top School
Mark Bouts is a Clinical Data Scientist with 13 years of experience bridging medical imaging, medical physics and data science to improve acute care and neurology outcomes. He has translated advanced MRI signal-processing and machine learning methods from PhD and postdoctoral work through roles at Harvard/MGH, LUMC and Philips into applied clinical research and product-focused solutions. Currently at Prinses Máxima Centrum he focuses on clinical data applications in pediatric oncology, building on prior work predicting tissue outcome after stroke and early dementia classification. Comfortable with embedded systems and low-level C/C++ from earlier engineering internships, he combines rigorous academic training with hands-on software engineering to move models from research to the clinic. An atypical thread through his career is a sustained interest in both acute healthcare analytics and ecological topics like bird migration, reflecting a curiosity for complex spatiotemporal systems.
code13 years of coding experience
job10 years of employment as a software developer
bookEmbedded Systems, Embedded Systems at Eindhoven University of Technology
bookMSc, Biomedical Sciences, MSc, Biomedical Sciences at Utrecht University
bookBSc, Computer Science, BSc, Computer Science at Zuyd University of Applied Sciences
languagesEnglish, German, French, Dutch
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Github Skills (92)

variants10
package-management10
extractor10
conda-forge10
lcs10
bioconda10
infiniband10
conda10
genetics10
mpi10
edit-distance10
bioinformatics10
language-bindings10
sequence10
journal9

Programming languages (14)

CScalaTeXVueHTMLShellAstroJavaScript

Github contributions (5)

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varda/varda2_preprocessing

Dec 2019 - Aug 2020

Extract coverage information from gVCF and variants from VCF files and output in tabular format.
Contributions:60 commits, 48 pushes, 1 branch in 7 months
vcf-filesgvcfcoveragengsbed
Conda recipes for the bioconda channel.
Contributions:62 pushes, 32 branches in 4 years
biocondabioinformaticsrecipesconda
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