Martin Aryee
Associate Professor
Boston, Massachusetts, United States
Summary
👤
Senior🎓
Top SchoolMartin Aryee is an Associate Professor and computational biologist based in Boston, combining 11 years of experience developing statistical methods for genomics and genome engineering across Mass General, Dana-Farber, and the Broad Institute. Trained with a PhD in Biostatistics from Harvard and earlier degrees in neuroscience and electronic engineering from King's College and Imperial College, he bridges quantitative rigor with practical lab-scale genomics. He directs method development and teaching in statistical genetics at Harvard T.H. Chan School of Public Health while holding institute roles at Broad and Dana-Farber, translating cutting-edge algorithms into tools used by genomics researchers. His work sits at the intersection of statistics, software, and experimental design, emphasizing reproducible analysis pipelines for genome engineering datasets. Colleagues rely on him for both methodological innovation and clear pedagogy, and his lab’s presence across major Boston research centers highlights a rare combination of academic leadership and hands-on computational practice.
11 years of coding experience
M.Eng, Electronic Engineering, M.Eng, Electronic Engineering at Imperial College LondonMSc, Neuroscience, MSc, Neuroscience at King's College LondonDoctor of Philosophy (Ph.D.), Biostatistics, Doctor of Philosophy (Ph.D.), Biostatistics at Harvard T.H. Chan School of Public Health
Github Skills (18)
preprocessing10
seq10
tracks10
sequencing10
bioinformatics10
shiny9
pipeline9
cloud-computing8
3d7
data-analysis6
r4
file-format4
python3
package3
docker2
Programming languages (5)
Github contributions (5)
aryeelab/nanopore-tools
Apr 2019 - Feb 2024
Tools for Oxford Nanopore
Contributions:3 releases, 2 PRs, 126 pushes in 4 years 10 months
oxford-nanoporenanoporeoxford
aryeelab/umi
Jan 2015 - May 2017
Preprocessing tools for unique molecular index (UMI) sequencing reads
Contributions:2 releases, 29 commits, 5 PRs in 2 years 4 months
preprocessingsequencing
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