Martin Holub
Research Engineer at ETH Zürich
Zurich, Zurich, Switzerland
Summary
👤
Senior🎓
Top SchoolMartin Holub is a research engineer based in Zurich with 9 years of interdisciplinary experience at the interface of wet lab biology and computational science. He trains neural networks, analyzes large omics datasets, and automates laboratory workflows—equally fluent in DNA protocols and Python code. Currently holding roles at UNOMR and ETH Zürich after a PhD from TU Delft and a master’s from ETH, he blends academic rigor with hands-on startup and community leadership, including co-founding Nucleate Netherlands and steering iGEM governance. Martin’s background spans cell culture to bioinformatics, and he uniquely translates experimental bottlenecks into scalable software and automation solutions. Expect a pragmatic scientist-engineer who accelerates discovery by shipping reproducible pipelines and lab automation, with a proven knack for building communities as well as systems.
9 years of coding experience
5 years of employment as a software developer
Bachelor’s Degree, Bachelor’s Degree at Brno University of TechnologyMaster’s Degree, Master’s Degree at ETH ZürichPhD, PhD at Delft University of Technology
English, French, German, Slovak, Czech, Dutch
Stackoverflow
383reputation
247kreached
7answers
1question
Github Skills (40)
bioinformatics10
package-management9
conda9
bioconda8
snakemake8
rna-seq7
core-package6
q-learning6
keras6
picard6
tensorboard6
error-handling6
deep-learning6
tensorflow6
pipeline6
Programming languages (8)
Github contributions (5)
martinholub/jekyll_site
Feb 2018 - Feb 2025
full jekyll blog
Contributions:75 pushes, 1 branch in 7 years 2 months
jekyll-blogjekylljekyll-theme
martinholub/motrack
Jan 2018 - Feb 2022
Contributions:1 release, 2 pushes, 1 branch in 4 years 1 month
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