Mary O'neill
Director, Single Cell Genomics at University of Washington
San Diego, California, United States
Summary
👤
Senior🎓
Top SchoolMary O'Neill is a director-level geneticist and bioinformatics leader with 11 years of experience building production-scale single-cell genomics platforms and high-throughput NGS pipelines. At the University of Washington she leads operations that produce reproducible datasets of up to 8 million cells per experiment and has driven platform and computational upgrades that enable billion-cell projects and AI-driven biology. She combines wet-lab optimization with LIMS, QC and large-scale workflow engineering, while mentoring multidisciplinary teams and expanding community uptake through user groups and training. Previously she translated population-genetics methods into patent-supporting pipelines for diagnostics and led viral single-cell studies at Institut Pasteur, demonstrating an ability to move deep academic science into practical, product-focused applications. Based in San Diego, she pairs grant-winning academic credentials (NSF & EMBO-supported work) with hands-on operational leadership that shortens bench-to-insight timelines.
11 years of coding experience
2 years of employment as a software developer
Bachelor of Science (B.S.) Molecular Cellular and Developmental Biology, Bachelor of Science (B.S.) Molecular Cellular and Developmental Biology at University of WashingtonDoctor of Philosophy (Ph.D.) Genetics, Doctor of Philosophy (Ph.D.) Genetics at University of Wisconsin-Madison
Github Skills (45)
rna-seq10
single-cell-analysis9
bioinformatics9
transcriptomics9
computational-biology8
genomics8
phylogenetic-trees8
cran8
scanpy8
r-package7
single-cell-genomics7
sequencing7
python7
clustering6
machine-learning6
Programming languages (11)
Github contributions (5)
ONeillMB1/human
May 2016 - Sep 2018
Contributions:8 pushes, 1 branch in 2 years 4 months
pepperell-lab/blasto
Nov 2015 - Sep 2018
Contributions:22 pushes, 1 branch in 2 years 10 months
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