Massimiliano Volpe
Bioinformatics Specialist
Lund, Sweden
Summary
👤
Senior🎓
Top SchoolMassimiliano Volpe is a bioinformatics specialist with nine years of experience designing and delivering NGS data analysis pipelines across academic and clinical settings in Sweden. He has held technical leadership roles at Linköping University and SciLifeLab/NBIS, driving large-scale sequencing implementations for precision medicine and clinical genomics. Comfortable with Python, R and scalable workflow development, he combines practical pipeline engineering with deep domain knowledge of genomic feature annotation and transposable element analysis. His PhD work produced ClusterScan, a tool for detecting genomic feature clusters, and he has developed bespoke pipelines for circular RNA and TE discovery. Based in Lund, he bridges research and healthcare environments, translating novel methods into robust, production-ready analyses. Colleagues value him for tackling big data challenges while keeping a clear focus on clinical applicability.
9 years of coding experience
3 years of employment as a software developer
Doctor of Philosophy - PhD, Bioinformatics, Doctor of Philosophy - PhD, Bioinformatics at The Open UniversityMaster's degree, Bioinformatics, Master's degree, Bioinformatics at Sapienza Università di RomaMaster's degree, Biotechnology, Master's degree, Biotechnology at Università degli Studi di Napoli Federico II
Github Skills (39)
biomart9
shiny-apps9
illumina9
r-package7
bioinformatics7
nmf7
meta-analysis7
docker-container7
genome7
computational-biology7
genomics6
genome-annotation6
pipeline6
seq6
python6
Programming languages (6)
Github contributions (5)
Genomic-Medicine-Linkoping/pgx
Sep 2022 - Feb 2024
Pharmacogenomics pipeline
Contributions:16 reviews, 15 PRs, 73 pushes in 1 year 5 months
pipelinepharmacogenomicsgenomicsbioinformaticsnmf
pyrevo/ClusterScan
May 2017 - Aug 2021
Contributions:41 commits, 34 pushes, 3 branches in 4 years 4 months
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