Mateusz Staniak

Teaching Research Assistant at University of Wrocław

Wroclaw Metropolitan Area Poland
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Summary

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Senior
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Top School
Mateusz Staniak is a teaching and research-focused data scientist with nine years of experience at the intersection of statistics, machine learning and R-based software engineering. He leads an NCN-funded project on protein inference and quantification, develops scalable R packages for mass spectrometry analysis (notably as lead developer on MSstats and MSstatsConvert), and consults on bioinformatics and industry projects. Comfortable with both research and production, he combines PhD-level math/statistics training with hands-on cloud-based testing and deployment (AWS, Docker) to ensure performance and modularity. He teaches R regularly, co-organizes the local R user group in Wrocław, and contributes open-source tools that bridge theoretical methods and applied proteomics. An interesting facet of his profile is the blend of deep probabilistic research (e.g., SLOPE method and autoregressive processes) with practical ML explainability and package engineering across academia and industry.
code9 years of coding experience
job4 years of employment as a software developer
bookPhD Mathematics, PhD Mathematics at University of Wroclaw
bookPhD studies Information Science, PhD studies Information Science at Warsaw University of Technology
bookDoktor (Dr) Statistics, Doktor (Dr) Statistics at Hasselt University
languagesEnglish
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Github Skills (117)

mass10
exploratory10
lime10
dalex10
classifier10
mass-spectrometry10
r-package10
hypothesis-testing10
interpretable-machine-learning10
data-import10
explainable-artificial-intelligence10
meta-analysis10
svd10
xai10
survival-analysis10

Programming languages (6)

RTeXJavaScriptHTMLJupyter NotebookPython

Github contributions (5)

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Vitek-Lab/MSstatsBig

Aug 2022 - May 2024

MSstats functionality to handle large DIA datasets. Replaces standard MSstats converters with MSstatsBig converters.
Contributions:4 PRs, 29 pushes, 2 branches in 1 year 9 months
mstaniak/autoEDA-resources

Feb 2019 - Jun 2021

A list of software and papers related to automatic and fast Exploratory Data Analysis
Contributions:134 commits, 5 PRs, 117 pushes in 2 years 4 months
data-analysishypothesis-testingexploratoryrmeta-analysis
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