Matt Oates

Bristol, England, United Kingdom
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Summary

👤
Senior
Matt Oates is a Staff Engineer based in Bristol with 13 years of experience building data-driven, bioinformatics and genomics platforms that bridge research and clinical diagnostics. His background spans roles from Principal Scientist and Director of Science to Chief Data Officer, where he has led teams to turn complex biological data—telemetry, genomics and ontologies—into performant, production-grade systems and actionable insights. He blends deep academic training (PhD in Complexity Science/Computational Biology) with hands-on software engineering, frequently delivering distributed processing and real-time models for personalised fitness and genetic-diagnostic products. Known for ideation and learning, he excels at connecting domain science to pragmatic engineering, and has repeatedly taken contractor roles to solve high-impact problems for Genomics England–related projects. A practical polymath, he pairs systems-level architecture with low-level integrations (eg. robotic sensors and performant genomic representations) to accelerate translational outcomes.
code14 years of coding experience
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Stackoverflow

Stats
778reputation
6kreached
17answers
0questions
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Github Skills (197)

operation10
metadata10
perl10
capi10
chakra10
js10
bioperl10
raku10
bioinformatics10
ecosystem9
javascript9
autoencoder9
linux9
postgis9
testing9

Programming languages (20)

CSSC++CRustMakefileTeXGoPerl

Github contributions (5)

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MattOates/Stats

Jun 2014 - Jan 2020

Perl6 statistics modules
Contributions:25 commits, 7 PRs, 16 pushes in 5 years 8 months
perlstatistics
MattOates/melm

May 2016 - Jun 2022

Mask and assign protein sequences with ELM motif regions
Contributions:3 releases, 8 PRs, 39 pushes in 6 years 1 month
autoencodermaskregionselmmotif
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