Matteo Massidda
Postdoctoral Researcher at IRGB - CNR
Cagliari, Sardinia, Italy
Summary
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Rockstar🎓
Top SchoolMatteo Massidda is a postdoctoral researcher and bioinformatician with seven years of experience specializing in Next Generation Sequencing data analysis and reproducible NGS workflows using Python and R. He has progressed from hands-on molecular lab work to developing open-source, reproducible pipelines and contributing to community projects like bioconda while delivering biological interpretation across academic and research centers in Sardinia. Matteo combines a PhD in Molecular and Translational Medicine with teaching experience and practical expertise in single-cell RNA-seq and clinical prenatal sequencing, bridging wet-lab insights and computational rigor. Now at IRGB - CNR after roles at Università degli Studi di Sassari and CRS4, he is known for making complex genomic analyses accessible and reproducible for collaborators.
7 years of coding experience
2 years of employment as a software developer
PhD in Molecular and Translational Medicine, Molecular Biology - Bioinformatics, PhD in Molecular and Translational Medicine, Molecular Biology - Bioinformatics at University of CagliariLiceo Scientifico Statale "Michelangelo"
Italian, English, Spanish
Github Skills (38)
aggregate10
snakemake10
package-management10
conda10
fastq10
bioinformatics10
genomics10
fasta10
pypi10
bioconda10
python9
samtools9
genome9
workflow-management9
data-visualization9
Programming languages (5)
Github contributions (5)
massiddamt/massiddamt.github.io
Jun 2019 - Nov 2022
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Contributions:44 pushes, 1 branch in 3 years 5 months
templategithub-pages-templatemmistakesmistakesjekyll
solida-core/dima
Nov 2018 - Jul 2022
Snakemake pipeline to map DNA datasets to a given reference genome using BWA MEM and Samtools.
Contributions:5 releases, 74 commits, 5 PRs in 3 years 8 months
genomereference-genomednabioinformaticsmem
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