Matteo Schiavinato
Head Of Genomics Consulting at Sequentia Biotech
Barcelona, Catalonia, Spain
Summary
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Senior🎓
Top SchoolMatteo Schiavinato is Head of Genomics Consulting with a decade of experience turning large-scale genomics and transcriptomics data into reproducible insights using Nextflow, Python, R and HPC environments. He has led bioinformatics teams and core facilities, combining hands-on pipeline development with project management across academia and industry at institutions like BSC, BOKU and Sequentia Biotech. Matteo specializes in designing polyglot, user-friendly analysis pipelines and automating big-data workflows for hybrid genomes and long/short read NGS. He pairs deep computational skills in Linux and cluster computing with domain knowledge in evolutionary biology and climate-related life-sciences questions. As a former postdoc in bioinformatics and genomics, he brings both research rigor and production-grade software practices to consulting engagements. Fluent in turning complex methodological choices into practical, reproducible pipelines, he often focuses on streamlining analyses that bridge research and applied genomics.
10 years of coding experience
5 years of employment as a software developer
Master's degree Molecular Biology, Master's degree Molecular Biology at Università degli Studi di PadovaDoctor of Philosophy (Ph.D.) Computational Biology, Doctor of Philosophy (Ph.D.) Computational Biology at University of Natural Resources and Life Sciences, Vienna (BOKU)Maturità Scientifica Liceo Scientifico con Bilinguismo Inglese-Tedesco, Maturità Scientifica Liceo Scientifico con Bilinguismo Inglese-Tedesco at Liceo Scientifico Primo Levi, Montebelluna
Italian, English, German, Spanish, venetian, Catalan
Stackoverflow
582reputation
25kreached
7answers
38questions
Github Skills (121)
slurm10
genomics10
reproducible-science10
singularity10
nextflow10
reproducible-research10
bioinformatics10
pipeline9
dataflow9
nmf9
pipeline-framework9
hierarchical9
docker9
aws9
dna-sequences9
Programming languages (11)
Github contributions (5)
MatteoSchiavinato/all2vcf
Jul 2021 - Dec 2022
Contributions:13 releases, 43 commits, 41 pushes in 1 year 4 months
MatteoSchiavinato/manticore
Sep 2020 - Oct 2022
Contributions:1 release, 24 commits, 21 pushes in 2 years 1 month
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