Matthew Bendall
Research Assistant Professor at Weill Cornell Medicine
Washington, District of Columbia, United States
Summary
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Rockstar🎓
Top SchoolMatthew Bendall is a computational biologist and data scientist with 11 years of experience applying bioinformatics and software engineering to genomics problems, currently a Research Assistant Professor at Weill Cornell Medicine. His work spans microbiome and pathogen detection, HIV-1 assembly and phylodynamics, and characterization of the human endogenous retrovirus transcriptome, blending NGS-focused research with production-grade bioinformatics tooling. Prior roles at the DOE Joint Genome Institute and GW’s Computational Biology Institute reflect a track record of building scalable analysis pipelines and methods for complex viral and metagenomic data. He holds a Ph.D. in Genomics and Bioinformatics and brings both deep domain expertise and practical software development skills to translational and research projects. An oft-overlooked strength is his combination of rigorous computational methods with hands-on experience in pathogen detection workflows, enabling rapid iteration from algorithm to applied results.
11 years of coding experience
8 years of employment as a software developer
Doctor of Philosophy (Ph.D.), Genomics and Bioinformatics, Doctor of Philosophy (Ph.D.), Genomics and Bioinformatics at The George Washington UniversityMaster of Science (M.S.), Biology, General, Master of Science (M.S.), Biology, General at Brigham Young University
Github Skills (38)
variants10
cancer-genomics10
seq10
rna-seq10
bioinformatics10
genomics10
bacteria10
package-management9
genetics9
conda9
sequencing9
infectious-diseases9
bioconda9
population-genetics9
assembly8
Programming languages (4)
Github contributions (5)
mlbendall/telebuilder
Sep 2017 - Aug 2024
Identify transposable element loci from repeat annotations.
Contributions:2 releases, 2 PRs, 14 pushes in 6 years 11 months
gwcbi/haphpipe
Jan 2017 - Mar 2021
NGS viral assembly and population genetics
Contributions:1 release, 75 commits, 42 pushes in 4 years 1 month
geneticsviralviral-ngspopulation-geneticsngs
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