Matthew Stapylton
Bioinformatics Software Engineer II
New York, New York, United States
Summary
👤
Senior🎓
Top SchoolMatthew Stapylton is a bioinformatics software engineer with eight years of experience bridging mathematics, software engineering, and genetics research. Trained in mathematics with a concentration in scientific computing, he has built production pipelines for GWAS and metagenomic analyses and contributed to peer-reviewed publications while working at Mount Sinai. He progressed from technical support and team lead roles into bioinformatics, honing debugging, database, and extensibility skills that help him tackle complex research engineering problems. Now at Memorial Sloan Kettering, he focuses on scalable bioinformatics software for clinical research environments. Outside of work he designs recreational-math puzzles—developing a Sudoku-like game based on Skolem sequences—a project that exemplifies his appetite for combinatorial problem solving and creative algorithm design.
8 years of coding experience
5 years of employment as a software developer
Bachelor's degree, Mathematics, Bachelor's degree, Mathematics at Kenyon College
Github Skills (21)
microbiome10
sql-database9
database9
python8
phylogeny6
nightly6
staging4
qiime4
biplot3
placement3
bioinformatics3
ncbi2
taxonomy2
hierarchical2
tree-viewer2
Programming languages (5)
Github contributions (5)
skolem-squares/skolem-squares.github.io
Jun 2024 - Dec 2024
Contributions:171 pushes, 1 branch in 6 months
mstapylton/skolem_puzzle
Apr 2024 - Jun 2024
Contributions:44 pushes, 1 branch in 1 month
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